42 lines
855 B
Markdown
42 lines
855 B
Markdown
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# BioFormatsImageInfo
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Metadata extraction tool based on Bio-Formats
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### Compile
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```shell
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mvn compile
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```
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### run
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```shell
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mvn exec:java -Dexec.mainClass=jp.riken.neurodata.tools.BioFormatsImageInfo -Dexec.args="'[path to image file]'"
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```
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### make jar package
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```shell
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mvn package
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```
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### run by jar
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```shell
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java -jar target\bioformats-imageinfo-1.0.0.jar [path to image file]
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```
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### run by class
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```java
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import java.util.LinkedHashMap;
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import java.util.Map;
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import jp.riken.neurodata.tools.BioFormatsImageInfo;
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import jp.riken.neurodata.tools.BioFormatsException;
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String path = "[path to image file]";
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String format = "";
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Map<String, Object> metadata = new LinkedHashMap<String, Object>();
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try {
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format = BioFormatsImageInfo.readMetadata(path, metadata));
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} catch (BioFormatsImageException e) {
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// error occured
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e.printStackTrace();
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}
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```
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