2 Commits

4 changed files with 15 additions and 13 deletions

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@ -1,8 +1,9 @@
{ {
"recommendations": [ "recommendations": [
"vscjava.vscode-java-pack",
"esbenp.prettier-vscode", "esbenp.prettier-vscode",
"mosapride.zenkaku", "mosapride.zenkaku",
"streetsidesoftware.code-spell-checker" "redhat.fabric8-analytics",
"streetsidesoftware.code-spell-checker",
"vscjava.vscode-java-pack"
] ]
} }

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@ -13,5 +13,6 @@
"prettier.printWidth": 120, "prettier.printWidth": 120,
"prettier.singleQuote": true, "prettier.singleQuote": true,
"prettier.tabWidth": 4, "prettier.tabWidth": 4,
"java.configuration.updateBuildConfiguration": "interactive" "java.configuration.updateBuildConfiguration": "interactive",
"java.compile.nullAnalysis.mode": "automatic"
} }

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@ -2,13 +2,13 @@
Metadata extraction tool based on Bio-Formats Metadata extraction tool based on Bio-Formats
### make package ## make package
```shell ```shell
mvn package mvn package
``` ```
### run ## run
```shell ```shell
./target/dist/bin/bioformats-imageinfo "[path to image file]" ./target/dist/bin/bioformats-imageinfo "[path to image file]"
@ -17,16 +17,16 @@ mvn package
### run by jar ### run by jar
```shell ```shell
java -jar ./target/dist/lib/bioformats-imageinfo-1.1.4.jar "[path to image file]" java -jar ./target/dist/lib/bioformats-imageinfo-1.2.1.jar "[path to image file]"
``` ```
### run by fat jar ### run by fat jar
```shell ```shell
java -jar ./target/bioformats-imageinfo-1.1.4-jar-with-dependencies.jar "[path to image file]" java -jar ./target/bioformats-imageinfo-1.2.1-jar-with-dependencies.jar "[path to image file]"
``` ```
### library usage ## library usage
```java ```java
import java.util.LinkedHashMap; import java.util.LinkedHashMap;

10
pom.xml
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@ -5,13 +5,13 @@
<modelVersion>4.0.0</modelVersion> <modelVersion>4.0.0</modelVersion>
<groupId>jp.riken.neurodata.tools.BioFormatsImageInfo</groupId> <groupId>jp.riken.neurodata.tools.BioFormatsImageInfo</groupId>
<artifactId>bioformats-imageinfo</artifactId> <artifactId>bioformats-imageinfo</artifactId>
<version>1.1.4</version> <version>1.2.1</version>
<name>bioformats-imageinfo</name> <name>bioformats-imageinfo</name>
<url>https://neurodata.riken.jp</url> <url>https://neurodata.riken.jp</url>
<properties> <properties>
<bio-formats.version>6.14.0</bio-formats.version> <bio-formats.version>7.0.1</bio-formats.version>
<bioformats-imageinfo.mainClass>jp.riken.neurodata.tools.BioFormatsImageInfo</bioformats-imageinfo.mainClass> <bioformats-imageinfo.mainClass>jp.riken.neurodata.tools.BioFormatsImageInfo</bioformats-imageinfo.mainClass>
<maven.compiler.source>1.8</maven.compiler.source> <maven.compiler.source>1.8</maven.compiler.source>
@ -39,7 +39,7 @@
<plugin> <plugin>
<groupId>org.apache.maven.plugins</groupId> <groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-enforcer-plugin</artifactId> <artifactId>maven-enforcer-plugin</artifactId>
<version>3.3.0</version> <version>3.4.1</version>
<executions> <executions>
<execution> <execution>
<id>enforce-maven</id> <id>enforce-maven</id>
@ -59,7 +59,7 @@
<plugin> <plugin>
<groupId>org.apache.maven.plugins</groupId> <groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-dependency-plugin</artifactId> <artifactId>maven-dependency-plugin</artifactId>
<version>3.6.0</version> <version>3.6.1</version>
<executions> <executions>
<execution> <execution>
<id>copy-dependencies</id> <id>copy-dependencies</id>
@ -140,7 +140,7 @@
<plugin> <plugin>
<groupId>org.owasp</groupId> <groupId>org.owasp</groupId>
<artifactId>dependency-check-maven</artifactId> <artifactId>dependency-check-maven</artifactId>
<version>8.3.1</version> <version>8.4.2</version>
<executions> <executions>
<execution> <execution>
<goals> <goals>