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2 Commits
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4b56cfd9d8
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82e1d3844c
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5
.vscode/extensions.json
vendored
5
.vscode/extensions.json
vendored
@ -1,8 +1,9 @@
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{
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"recommendations": [
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"vscjava.vscode-java-pack",
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"esbenp.prettier-vscode",
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"mosapride.zenkaku",
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"streetsidesoftware.code-spell-checker"
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"redhat.fabric8-analytics",
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"streetsidesoftware.code-spell-checker",
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"vscjava.vscode-java-pack"
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]
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}
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3
.vscode/settings.json
vendored
3
.vscode/settings.json
vendored
@ -13,5 +13,6 @@
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"prettier.printWidth": 120,
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"prettier.singleQuote": true,
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"prettier.tabWidth": 4,
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"java.configuration.updateBuildConfiguration": "interactive"
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"java.configuration.updateBuildConfiguration": "interactive",
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"java.compile.nullAnalysis.mode": "automatic"
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}
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10
README.md
10
README.md
@ -2,13 +2,13 @@
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Metadata extraction tool based on Bio-Formats
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### make package
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## make package
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```shell
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mvn package
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```
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### run
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## run
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```shell
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./target/dist/bin/bioformats-imageinfo "[path to image file]"
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@ -17,16 +17,16 @@ mvn package
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### run by jar
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```shell
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java -jar ./target/dist/lib/bioformats-imageinfo-1.1.4.jar "[path to image file]"
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java -jar ./target/dist/lib/bioformats-imageinfo-1.2.1.jar "[path to image file]"
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```
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### run by fat jar
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```shell
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java -jar ./target/bioformats-imageinfo-1.1.4-jar-with-dependencies.jar "[path to image file]"
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java -jar ./target/bioformats-imageinfo-1.2.1-jar-with-dependencies.jar "[path to image file]"
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```
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### library usage
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## library usage
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```java
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import java.util.LinkedHashMap;
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10
pom.xml
10
pom.xml
@ -5,13 +5,13 @@
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<modelVersion>4.0.0</modelVersion>
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<groupId>jp.riken.neurodata.tools.BioFormatsImageInfo</groupId>
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<artifactId>bioformats-imageinfo</artifactId>
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<version>1.1.4</version>
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<version>1.2.1</version>
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<name>bioformats-imageinfo</name>
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<url>https://neurodata.riken.jp</url>
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<properties>
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<bio-formats.version>6.14.0</bio-formats.version>
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<bio-formats.version>7.0.1</bio-formats.version>
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<bioformats-imageinfo.mainClass>jp.riken.neurodata.tools.BioFormatsImageInfo</bioformats-imageinfo.mainClass>
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<maven.compiler.source>1.8</maven.compiler.source>
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@ -39,7 +39,7 @@
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<plugin>
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<groupId>org.apache.maven.plugins</groupId>
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<artifactId>maven-enforcer-plugin</artifactId>
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<version>3.3.0</version>
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<version>3.4.1</version>
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<executions>
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<execution>
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<id>enforce-maven</id>
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@ -59,7 +59,7 @@
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<plugin>
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<groupId>org.apache.maven.plugins</groupId>
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<artifactId>maven-dependency-plugin</artifactId>
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<version>3.6.0</version>
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<version>3.6.1</version>
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<executions>
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<execution>
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<id>copy-dependencies</id>
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@ -140,7 +140,7 @@
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<plugin>
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<groupId>org.owasp</groupId>
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<artifactId>dependency-check-maven</artifactId>
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<version>8.3.1</version>
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<version>8.4.2</version>
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<executions>
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<execution>
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<goals>
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