bioformats-imageinfo/pom.xml

<?xml version="1.0" encoding="UTF-8"?>

<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
  xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
  <modelVersion>4.0.0</modelVersion>
  <groupId>jp.riken.neurodata.tools.BioFormatsImageInfo</groupId>
  <artifactId>bioformats-imageinfo</artifactId>
  <version>1.1.0</version>

  <name>bioformats-imageinfo</name>
  <url>https://neurodata.riken.jp</url>

  <properties>
    <bio-formats.version>6.10.0</bio-formats.version>
    <bioformats-imageinfo.mainClass>jp.riken.neurodata.tools.BioFormatsImageInfo</bioformats-imageinfo.mainClass>

    <maven.compiler.source>1.8</maven.compiler.source>
    <maven.compiler.target>1.8</maven.compiler.target>

    <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
    <project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding>
  </properties>

  <dependencies>
    <dependency>
      <groupId>ome</groupId>
      <artifactId>bio-formats-tools</artifactId>
      <version>${bio-formats.version}</version>
    </dependency>
  </dependencies>

  <build>
    <plugins>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-dependency-plugin</artifactId>
        <version>3.3.0</version>
        <executions>
          <execution>
            <id>copy-dependencies</id>
            <phase>prepare-package</phase>
            <goals>
              <goal>copy-dependencies</goal>
            </goals>
            <configuration>
              <overWriteIfNewer>true</overWriteIfNewer>
           </configuration>
          </execution>
        </executions>
      </plugin>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-jar-plugin</artifactId>
        <version>3.2.2</version>
        <configuration>
          <archive>
            <manifest>
              <addClasspath>true</addClasspath>
	      <mainClass>${bioformats-imageinfo.mainClass}</mainClass>
            </manifest>
          </archive>
        </configuration>
      </plugin>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-assembly-plugin</artifactId>
	<version>3.4.1</version>
        <configuration>
          <descriptorRefs>
            <descriptorRef>jar-with-dependencies</descriptorRef>
          </descriptorRefs>
          <archive>
            <manifest>
	      <mainClass>${bioformats-imageinfo.mainClass}</mainClass>
            </manifest>
          </archive>
        </configuration>
        <executions>
          <execution>
            <id>make-assembly</id>
            <phase>package</phase>
            <goals>
              <goal>single</goal>
            </goals>
          </execution>
        </executions>
      </plugin>
      <plugin>
        <groupId>org.codehaus.mojo</groupId>
        <artifactId>appassembler-maven-plugin</artifactId>
        <version>1.10</version>
        <configuration>
          <assembleDirectory>${project.build.directory}/dist</assembleDirectory>
	  <repositoryLayout>flat</repositoryLayout>
	  <repositoryName>lib</repositoryName>
          <programs>
            <program>
	      <mainClass>${bioformats-imageinfo.mainClass}</mainClass>
	      <id>${project.name}</id>
            </program>
          </programs>
        </configuration>
        <executions>
          <execution>
            <phase>package</phase>
            <goals>
              <goal>assemble</goal>
            </goals>
          </execution>
        </executions>
      </plugin>
      <plugin>
        <groupId>org.owasp</groupId>
        <artifactId>dependency-check-maven</artifactId>
        <version>7.1.1</version>
        <executions>
          <execution>
            <goals>
              <goal>check</goal>
            </goals>
          </execution>
        </executions>
      </plugin>
    </plugins>
  </build>

  <pluginRepositories>
    <pluginRepository>
      <id>central</id>
      <name>Central Repository</name>
      <url>https://repo.maven.apache.org/maven2</url>
      <layout>default</layout>
    </pluginRepository>
  </pluginRepositories>
  <repositories>
    <repository>
      <id>central</id>
      <name>Central Repository</name>
      <url>https://repo.maven.apache.org/maven2</url>
    </repository>
    <repository>
      <id>ome</id>
      <name>OME Artifactory</name>
      <url>https://artifacts.openmicroscopy.org/artifactory/maven/</url>
    </repository>
    <repository>
      <id>unidata.releases</id>
      <url>https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases</url>
    </repository>
  </repositories>

</project>