284 lines
16 KiB
HTML
284 lines
16 KiB
HTML
<!DOCTYPE html>
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<html>
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<title>CBS Data Sharing Platform</title>
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<meta charset="UTF-8" />
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<meta name="viewport" content="width=device-width, initial-scale=1" />
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<link rel="stylesheet" href="./assets/css/w3.css" />
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<link rel="stylesheet" href="./assets/css/style.css" />
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<link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Raleway" />
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<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.15.3/css/fontawesome.min.css" />
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<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.15.3/css/brands.min.css" />
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<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/5.15.3/css/solid.min.css" />
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<body>
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<!-- Navbar (sit on top) -->
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<header class="w3-top w3-bar w3-white w3-card" id="cbsDspNavbar">
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<a href="#home" class="w3-bar-item w3-button">
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<div class="cbs-dsp-logo">
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<span class="w3-hide">CBS Data Sharing Platform</span>
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</div>
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</a>
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<nav class="cbs-dsp-navbar-links">
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<!-- Right-sided navbar links -->
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<div class="w3-hide-small w3-right w3-clear">
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<a href="#observation" class="w3-bar-item w3-button cbs-dsp-navbar-item"><i class="fas fa-binoculars"></i> Data repository observation</a>
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<a href="https://brainminds.jp/en/" class="w3-bar-item w3-button cbs-dsp-navbar-item" target="_blank" rel="noopener noreferrer"><i class="fas fa-brain"></i> Brain/MINDS project</a>
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<a href="#archive" class="w3-bar-item w3-button cbs-dsp-navbar-item"><i class="fas fa-database"></i> BSI DB archive</a>
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<a href="#termofuse" class="w3-bar-item w3-button cbs-dsp-navbar-item"><i class="fas fa-file-signature"></i> Term of use</a>
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<div class="w3-dropdown-hover cbs-dsp-navbar-item">
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<button class="w3-bar-item w3-button w3-clear"><i class="fas fa-globe"></i> Language</button>
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<div class="w3-dropdown-content w3-bar-block w3-border">
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<a href="./" class="w3-bar-item w3-button">English</a>
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<a href="./index.html.ja" class="w3-bar-item w3-button">Japanese</a>
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</div>
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</div>
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</div>
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<!-- Hide right-floated links on small screens and replace them with a menu icon -->
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<button class="w3-bar-item w3-button w3-hide-large w3-hide-medium cbs-dsp-navbar-links-mbutton" onclick="openSidebar()">
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<i class="fas fa-bars"></i>
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</button>
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</nav>
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</header>
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<!-- Sidebar on small screens when clicking the menu icon -->
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<nav class="w3-sidebar w3-bar-block w3-black w3-card w3-animate-left w3-hide-medium w3-hide-large" id="cbsDspSidebar">
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<a href="javascript:void(0)" onclick="closeSidebar()" class="w3-bar-item w3-button w3-large w3-padding-16">Close ×</a>
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<a href="#observation" onclick="closeSidebar()" class="w3-bar-item w3-button"><i class="fas fa-binoculars"></i> Data repository ovservation</a>
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<a href="https://brainminds.jp/en/" onclick="closeSidebar()" class="w3-bar-item w3-button" target="_blank" rel="noopener noreferrer"><i class="fas fa-brain"></i> Brain/MINDS project</a>
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<a href="#archive" onclick="closeSidebar()" class="w3-bar-item w3-button"><i class="fas fa-database"></i> BSI DB archive</a>
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<a href="#termofuse" onclick="closeSidebar()" class="w3-bar-item w3-button"><i class="fas fa-file-signature"></i> Term of use</a>
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<div class="w3-dropdown-hover cbs-dsp-navbar-item">
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<button class="w3-bar-item w3-button w3-clear"><i class="fas fa-globe"></i> Language</button>
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<div class="w3-dropdown-content w3-bar-block w3-dark-gray">
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<a href="./" class="w3-bar-item w3-button">English</a>
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<a href="./index.html.ja" class="w3-bar-item w3-button">Japanese</a>
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</div>
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</div>
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</nav>
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<!-- Home -->
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<section class="w3-display-container" id="home">
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<div class="w3-text-white cbs-dsp-section">
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<h1 class="w3-text-orange">CBS Data Sharing Platform</h1>
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<p class="w3-large">We aim to achieve an analysis platform for the open neuroscience data to expand the research field for each individual in CBS. CBS-DSP provides comprehensive data collection, which allows CBS scientists to generate and stimulate data-driven cross-modal neuroscience. We also plan to expand the platform for all RIKEN, which we expect for CBS researchers to broaden their research field beyond neuroscience.</p>
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<p class="w3-right-align w3-padding-16">
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<button class="w3-button w3-white w3-padding-large w3-large w3-margin-top" onclick="showMemberList()">CBS Data Sharing WG</button>
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</p>
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</div>
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</section>
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<!-- member list -->
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<div id="memberlist" class="w3-modal w3-black" onclick="this.style.display='none'">
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<span class="w3-button w3-xxlarge w3-black w3-padding-large w3-display-topright" title="Close Member list">×</span>
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<div class="w3-modal-content w3-animate-zoom w3-center w3-transparent w3-padding-64">
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<div class="w3-card w3-white w3-left-align">
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<h1 class="w3-center">CBS Data Shairng Working Group</h1>
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<ul class="w3-xlarge">
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<li>Tomomi SHIMOGORI (Chair)</li>
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<li>Shigeyoshi FUJISAWA (Deputy Chair)</li>
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<li>Andrea BENUCCI</li>
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<li>Kazuhisa SHIBATA</li>
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<li>Atushi TAKATA</li>
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<li>Alexander WOODWARD</li>
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<li>Keiji TANAKA</li>
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</ul>
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</div>
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</div>
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</div>
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<!-- Database repository observation -->
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<section class="w3-display-container cbs-dsp-section" id="observation">
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<h1 class="w3-center"><i class="fas fa-binoculars"></i> Data repository observation</h1>
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<div class="w3-row-padding w3-center">
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<div class="w3-col l6 m6 w3-margin-bottom">
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<a href="https://neurodata.riken.jp/mdrs/finder/">
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<div class="w3-card">
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<i class="fas fa-search w3-margin-bottom w3-jumbo w3-center"></i>
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<h2>Search for data set</h2>
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<p>Use the CBS-DSP Inventory to search across all data archives and find links to raw data</p>
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</div>
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</a>
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</div>
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<div class="w3-col l6 m6 w3-margin-bottom">
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<a href="https://neurodata.riken.jp/mdrs/explorer/labs">
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<div class="w3-card">
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<i class="fas fa-users w3-margin-bottom w3-jumbo"></i>
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<h2>List of labs</h2>
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<p>Data collections are listed by lab PI names</p>
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</div>
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</a>
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</div>
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<div class="w3-col l6 m6 w3-margin-bottom">
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<div class="w3-card">
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<i class="fas fa-file-alt w3-margin-bottom w3-jumbo"></i>
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<h2>Data for papers</h2>
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<p>List of papers that used data within the repository</p>
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</div>
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</div>
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<div class="w3-col l6 m6 w3-margin-bottom">
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<div class="w3-card">
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<i class="fas fa-th w3-margin-bottom w3-jumbo"></i>
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<h2>Types of data</h2>
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<p>List of data types (molecular, electrical physiology, structure, imaging)</p>
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</div>
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</div>
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</div>
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</section>
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<!-- List of laboratories -->
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<!--
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<section class="w3-display-container w3-light-grey cbs-dsp-section" id="labs">
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<h1 class="w3-center"><i class="fas fa-users"></i> List of laboratories</h1>
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<p class="w3-center w3-large">Data collections are listed by lab PI names</p>
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<div class="w3-display-container">
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<ul class="w3-large">
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<li><a href="https://neurodata.riken.jp/mdrs/explorer/?id=1">Molecular Mechanism of Brain Development (Tomomi Shimogori, Ph.D.)</a></li>
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<li><a href="https://neurodata.riken.jp/mdrs/explorer/?id=2">Cognitive Brain Mapping (Keiji Tanaka, Ph.D.)</a></li>
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</ul>
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</div>
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</section>
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-->
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<!-- BSI database archive -->
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<section class="w3-display-container w3-light-grey cbs-dsp-section" id="archive">
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<h1 class="w3-center"><i class="fas fa-database"></i> BSI database archive</h1>
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<div class="w3-display-container w3-row-padding">
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<div class="w3-col l6">
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<h2>INCF Japan Node</h2>
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<ul>
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<li><a href="https://www.neuroinf.jp/" target="_blank" rel="noopener noreferrer">INCF Japan Node Portal Site</a></li>
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<li><a href="https://visiome.neuroinf.jp/" target="_blank" rel="noopener noreferrer">Visiome Platform</a></li>
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<li><a href="https://bmi.neuroinf.jp/" target="_blank" rel="noopener noreferrer">BMI Platform</a></li>
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<li><a href="https://nimg.neuroinf.jp/" target="_blank" rel="noopener noreferrer">NeuroImaging Platform</a></li>
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<li><a href="https://invbrain.neuroinf.jp/" target="_blank" rel="noopener noreferrer">Invertebrate Brain Platform</a></li>
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<li><a href="https://cerebellum.neuroinf.jp/" target="_blank" rel="noopener noreferrer">Cerebellar Platform (previous version)</a></li>
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<li><a href="https://www.hokatsu-nou.neuroinf.jp/" target="_blank" rel="noopener noreferrer">Comprehensive Brain Science Network</a></li>
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<li><a href="https://cbsn.neuroinf.jp/" target="_blank" rel="noopener noreferrer">Comprehensive Brain Science Network Platform</a></li>
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<li><a href="https://open.neuroinf.jp/" target="_blank" rel="noopener noreferrer">OpenNeuro Repository</a></li>
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</ul>
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</div>
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<div class="w3-col l6">
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<h2>BSI Neuroinformatics</h2>
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<ul>
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<li><a href="https://bsi-ni.brain.riken.jp/" target="_blank" rel="noopener noreferrer">BSI-NI Project</a></li>
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<li><a href="https://celloc3d.brain.riken.jp/" target="_blank" rel="noopener noreferrer">CelLoc3D</a></li>
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<li><a href="https://brainatlas.brain.riken.jp/" target="_blank" rel="noopener noreferrer">Brain Atlas</a></li>
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<li><a href="https://pupil.brain.riken.jp/" target="_blank" rel="noopener noreferrer">Pupil Platform</a></li>
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</ul>
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<h2>Tool</h2>
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<ul>
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<li><a href="https://xoonips.osdn.jp/" target="_blank" rel="noopener noreferrer">XooNIps</a></li>
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<li><a href="https://cosmodb.osdn.jp/" target="_blank" rel="noopener noreferrer">CosmoDB</a></li>
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</ul>
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</div>
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</div>
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</section>
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<!-- Term of use -->
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<section class="w3-container cbs-dsp-section" id="termofuse">
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<h1 class="w3-center"><i class="fas fa-file-signature"></i> Term of use</h1>
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<h2>CBS-DSP Data Policies</h2>
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<p class="w3-large">Our goal is to generate a searchable data repository platform that will integrate molecular, anatomical, and functional, data which allow us to perform for comprehensive research on mouse, human, and non-human primate brains.</p>
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<p class="w3-large">All data production, repository and meta data will be appended by each lab based on the lab heads responsibility. Currently, data access is limited to CBS members.</p>
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<h2>Disclaimer</h2>
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<p class="w3-large">Some members of the CBS may claim patent, copyright, or other intellectual property rights in all or a portion of the data they have submitted. The CBS NIU is not in a position to assess the validity of such claims, and therefore cannot provide comment or unrestricted permission concerning the use, copying, or distribution of the information contained in the CBS-DSP.</p>
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<h2>Citation and Acknowledgement</h2>
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<p class="w3-large">We request that researchers who use CBS-DSP (published or unpublished) in presentations and publications cite and acknowledge the CBS-DSP and data production laboratory(s) for referenced dataset(s).</p>
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</section>
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<!-- Footer -->
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<footer id="footer" class="w3-center w3-black w3-padding-64">
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<div class="cbs-dsp-tothetop">
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<a href="#home" class="w3-button w3-light-grey"><i class="fas fa-arrow-up w3-margin-right"></i>To the top</a>
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</div>
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<div class="w3-display-container w3-row-padding cbs-dsp-links">
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<div class="w3-col l3 m3 s6 w3-margin-bottom">
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<div class="w3-card">
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<button class="w3-button w3-light-gray w3-block">
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<a href="http://www.riken.jp/" alt="RIKEN" target="_blank" rel="noopener noreferrer">
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<p>RIKEN</p>
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<img src="./assets/images/link-riken.png" alt="RIKEN" />
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</a>
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</button>
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</div>
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</div>
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<div class="w3-col l3 m3 s6 w3-margin-bottom">
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<div class="w3-card">
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<button class="w3-button w3-light-gray w3-block">
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<a href="https://cbs.riken.jp/" alt="RIKEN Center for Brain Science" target="_blank" rel="noopener noreferrer">
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<p>RIKEN CBS</p>
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<img src="./assets/images/link-cbs.png" alt="RIKEN Center for Brain Science" />
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</a>
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</button>
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</div>
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</div>
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<div class="w3-col l3 m3 s6 w3-margin-bottom">
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<div class="w3-card">
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<div class="w3-button w3-light-gray w3-block">
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<a href="https://olsp.riken.jp/" alt="RIKEN Open Life Science Platform" target="_blank" rel="noopener noreferrer">
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<p>RIKEN OLSP</p>
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<img src="./assets/images/link-olsp.png" alt="RIKEN Open Life Science Platform" />
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</a>
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</div>
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</div>
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</div>
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<div class="w3-col l3 m3 s6 w3-margin-bottom">
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<div class="w3-card">
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<button class="w3-button w3-light-gray w3-block">
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<a href="https://www.ni.riken.jp/" alt="Neuroinformatics Unit, RIKEN Center for Brain Science" target="_blank" rel="noopener noreferrer">
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<p>CBS NIU</p>
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<img src="./assets/images/link-niu.png" alt="Neuroinformatics Unit, RIKEN Center for Brain Science" />
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</a>
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</button>
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</div>
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</div>
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</div>
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<p class="cbs-copyright">© <a href="https://www.ni.riken.jp/" target="_blank">Neuroinformatics Unit, RIKEN Center for Brain Science</a></p>
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</footer>
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<script>
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var cbsDspSidebar = document.getElementById("cbsDspSidebar");
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function openSidebar() {
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}
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function closeSidebar() {
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cbsDspSidebar.style.display = "none";
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}
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document.getElementById("memberlist").style.display = "block";
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}
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</script>
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