from argparse import Namespace from typing import Any from mdrsclient.api import LaboratoriesApi from mdrsclient.commands.base import BaseCommand class LabsCommand(BaseCommand): @classmethod def register(cls, parsers: Any) -> None: labs_parser = parsers.add_parser("labs", help="list all laboratories") labs_parser.add_argument("remote", help="label of remote host") labs_parser.set_defaults(func=cls.func) @classmethod def func(cls, args: Namespace) -> None: remote = str(args.remote) cls.labs(remote) @classmethod def labs(cls, remote: str) -> None: remote = cls._parse_remote_host(remote) connection = cls._create_connection(remote) laboratory_api = LaboratoriesApi(connection) laboratories = laboratory_api.list() connection.laboratories = laboratories label = {"id": "ID", "name": "Name", "pi_name": "PI", "full_name": "Laboratory"} length: dict[str, int] = {} for key in label.keys(): length[key] = len(label[key]) for laboratory in laboratories: length["id"] = max(length["id"], len(str(laboratory.id))) length["name"] = max(length["name"], len(laboratory.name)) length["pi_name"] = max(length["pi_name"], len(laboratory.pi_name)) length["full_name"] = max(length["full_name"], len(laboratory.full_name)) header = ( # f"{label['id']:{length['id']}}\t{label['name']:{length['name']}}\t" f"{label['name']:{length['name']}}\t" f"{label['pi_name']:{length['pi_name']}}\t{label['full_name']:{length['full_name']}}" ) print(header) print("-" * len(header.expandtabs())) for laboratory in laboratories: print( # f"{laboratory.id:{length['id']}}\t{laboratory.name:{length['name']}}\t" f"{laboratory.name:{length['name']}}\t" f"{laboratory.pi_name:{length['pi_name']}}\t{laboratory.full_name:{length['full_name']}}" )