orrisroot
5bdf837941
Support accessing repositories using DOI strings with optional subpaths
across ls, download, metadata, and file-metadata commands.
- Implement GET v3/doi/{id}/ API model and client calls
- Parse and resolve DOI paths into respective folder and files
- Extract common folder and file resolution logic to shared helpers
- Update README with example DOI-based shell commands
38 lines
1.6 KiB
Python
38 lines
1.6 KiB
Python
import os
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from argparse import Namespace
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from typing import Any
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from unicodedata import normalize
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from mdrsclient.api import FoldersApi
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from mdrsclient.commands.base import BaseCommand
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from mdrsclient.exceptions import IllegalArgumentException
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from mdrsclient.models.file import find_file
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class MkdirCommand(BaseCommand):
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@classmethod
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def register(cls, parsers: Any) -> None:
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mkdir_parser = parsers.add_parser("mkdir", help="create a new folder")
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mkdir_parser.add_argument("remote_path", help="remote folder path (remote:/lab/path/)")
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mkdir_parser.set_defaults(func=cls.func)
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@classmethod
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def func(cls, args: Namespace) -> None:
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remote_path = str(args.remote_path)
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cls.mkdir(remote_path)
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@classmethod
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def mkdir(cls, remote_path: str) -> None:
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remote, laboratory_name, r_path = cls._parse_remote_host_with_path(remote_path)
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r_path = r_path.rstrip("/")
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r_dirname = os.path.dirname(r_path)
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r_basename = os.path.basename(r_path)
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connection = cls._create_connection(remote)
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laboratory = cls._find_laboratory(connection, laboratory_name)
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parent_folder = cls._find_folder(connection, laboratory, r_dirname)
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files = cls._find_files(connection, parent_folder.id)
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if parent_folder.find_sub_folder(r_basename) is not None or find_file(files, r_basename) is not None:
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raise IllegalArgumentException(f"Cannot create folder `{r_path}`: File exists.")
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folder_api = FoldersApi(connection)
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folder_api.create(normalize("NFC", r_basename), parent_folder.id)
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