orrisroot
4c9954c1fd
flake8 reported 49 findings and pyright 10, and two of them were real bugs rather than matters of style. The rest were unused imports and four functions over the complexity limit. - Unlock a DOI folder with the id the DOI response carries, rather than an attribute the model does not have, which raised `AttributeError` on every locked DOI folder. - Size the `ls` Size column from the sub-folder on the row rather than from its parent, which pushed the later columns out of line. - Share the path resolution and the destination checks between `cp` and `mv`, and split the recursive download and the `ls` row printing, bringing all four functions under the complexity limit. - Accept a client built without a connection, which `config` and `version` rely on, and report the reason if one is then asked for. - Declare the config protocol's constructor for the type checker alone, so the protocol keeps its guard against being instantiated. - Remove 41 unused imports, and let flake8 accept black's spacing. - Point pyright at the project's own environment, without which it resolved no dependency and reported 124 findings that were not real. - Cover the two fixes and the shared `cp`/`mv` paths with new tests.
46 lines
1.8 KiB
Python
46 lines
1.8 KiB
Python
from argparse import Namespace
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from typing import Any
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from mdrsclient.commands.base import BaseCommand
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class LabsCommand(BaseCommand):
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@classmethod
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def register(cls, parsers: Any) -> None:
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labs_parser = parsers.add_parser("labs", help="list all laboratories")
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labs_parser.add_argument("remote", help="label of remote host")
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labs_parser.set_defaults(func=cls.func)
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@classmethod
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def func(cls, args: Namespace) -> None:
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remote = str(args.remote)
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cls.labs(remote)
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@classmethod
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def labs(cls, remote: str) -> None:
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from mdrsclient.client import MdrsClient
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remote_host = MdrsClient.parse_remote_host(remote)
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client = MdrsClient.from_remote(remote_host)
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laboratories = client.get_laboratories()
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label = {"id": "ID", "name": "Name", "pi_name": "PI", "full_name": "Laboratory"}
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length: dict[str, int] = {}
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for key in label.keys():
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length[key] = len(label[key])
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for laboratory in laboratories:
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length["id"] = max(length["id"], len(str(laboratory.id)))
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length["name"] = max(length["name"], len(laboratory.name))
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length["pi_name"] = max(length["pi_name"], len(laboratory.pi_name))
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length["full_name"] = max(length["full_name"], len(laboratory.full_name))
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header = (
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f"{label['name']:{length['name']}}\t"
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f"{label['pi_name']:{length['pi_name']}}\t{label['full_name']:{length['full_name']}}"
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)
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print(header)
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print("-" * len(header.expandtabs()))
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for laboratory in laboratories:
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print(
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f"{laboratory.name:{length['name']}}\t"
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f"{laboratory.pi_name:{length['pi_name']}}\t{laboratory.full_name:{length['full_name']}}"
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)
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