mdrs-client-python/mdrsclient/commands/labs.py

49 lines
2.0 KiB
Python

from argparse import Namespace
from typing import Any
from mdrsclient.api import LaboratoriesApi
from mdrsclient.commands.base import BaseCommand
class LabsCommand(BaseCommand):
@classmethod
def register(cls, parsers: Any) -> None:
labs_parser = parsers.add_parser("labs", help="list all laboratories")
labs_parser.add_argument("remote", help="label of remote host")
labs_parser.set_defaults(func=cls.func)
@classmethod
def func(cls, args: Namespace) -> None:
remote = str(args.remote)
cls.labs(remote)
@classmethod
def labs(cls, remote: str) -> None:
remote = cls._parse_remote_host(remote)
connection = cls._create_connection(remote)
laboratory_api = LaboratoriesApi(connection)
laboratories = laboratory_api.list()
connection.laboratories = laboratories
label = {"id": "ID", "name": "Name", "pi_name": "PI", "full_name": "Laboratory"}
length: dict[str, int] = {}
for key in label.keys():
length[key] = len(label[key])
for laboratory in laboratories:
length["id"] = max(length["id"], len(str(laboratory.id)))
length["name"] = max(length["name"], len(laboratory.name))
length["pi_name"] = max(length["pi_name"], len(laboratory.pi_name))
length["full_name"] = max(length["full_name"], len(laboratory.full_name))
header = (
# f"{label['id']:{length['id']}}\t{label['name']:{length['name']}}\t"
f"{label['name']:{length['name']}}\t"
f"{label['pi_name']:{length['pi_name']}}\t{label['full_name']:{length['full_name']}}"
)
print(header)
print("-" * len(header.expandtabs()))
for laboratory in laboratories:
print(
# f"{laboratory.id:{length['id']}}\t{laboratory.name:{length['name']}}\t"
f"{laboratory.name:{length['name']}}\t"
f"{laboratory.pi_name:{length['pi_name']}}\t{laboratory.full_name:{length['full_name']}}"
)